EQUIPMENTS

visit the EPITRANS INFRASTRUCTURE

List of equipments

SEEDS STORAGE & PLANTS CULTURE

• Two cold-rooms for seeds storage

  

• Growth HOT chambers, in vitro and greenhouses facilities

  

Cellular biology

• Berthold Technologies Nightshade LB985

            Mutants phenotyping and characterization

  

• Arcturus XT Laser Capture / Cutting Microdissection (LCM)

  

• Logos Biosystems X-Clarity transparency station

  

Molecular biology

• Christ-Iso Lyophilisator, Lyocube Alpha

  

• Eppendorf and Applied Biogen 384 thermocyclers park

  

• Beckman Fx Biomek liquid handling automation

            Configured for high troughput DNA extraction

  

• Fluidigm Access Array PCR system:

                    Targeted DNA NGS library preparation (48.48 IFC)

• Covaris S220 Focused-ultrasonicator

  

• Sage Science PippinHT

            High Throughput Size Selection for Next-Gen Sequencing

  

• Agilent 2100 Bioanalyzer instrument

  

• BIO-RAD Droplet Digital^TM PCR system : QX200^TM AutoDG^TM

  

• LOGOS BIOSYSTEMS LUNA™ Automated Cell Counter

  

NGS technologies

• Illumina Sequencers :MiSeq^TM & NextSeq500^TM systems

  

  

• 10X Genomics Chromium single cell gene expression

  

BIOINFORMATICS

IPS2 informatics core provides resources and skills to support IPS2 teams in the field of Bioinformatics.

• For small scale analysis we have access to local power data center of 276 processors, 780 Go memory and 3 GPU cards.

• For large scale analysis we have access to a Data Center (GENOTOUL) of about 5000 cores (INTEL-2014, AMD-2012), 34 Tera Byte memory (3TB on a SMP machine) and data storage. The data center permits access to more than 200 softwares, web servers and virtual machines hosting infrastructure.

• CLC station