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Publications - Sexyparth

Équipe A. Bendahmane

46-Du Y, Roldan MVG, Haraghi A, Haili N, Izhaq F, Verdenaud M, Boualem A, Bendahmane A. Spatially expressed WIP genes control Arabidopsis embryonic root development. Nat Plants. 2022 Jun 16. doi: 10.1038/s41477-022-01172-4. Epub ahead of print. PMID: 35710883.

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45-Boualem A, Berthet S, Devani RS, Camps C, Fleurier S, Morin H, Troadec C, Giovinazzo N, Sari N, Dogimont C, Bendahmane A. Ethylene plays a dual role in sex determination and fruit shape in cucurbits. Curr Biol. 2022 Jun 6;32(11):2390-2401.e4. doi: 10.1016/j.cub.2022.04.031. Epub 2022 May 6. PMID: 35525245.

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44- Clement Pichot, Anis Djari, Joseph Tran, Marion Verdenaud, William Marande, Cecile Huneau, Veronique Gautier, David Latrasse, Sandrine Arribat, Vivien Sommard, Christelle Troadec, Charles Poncet, Mohammed Bendahmane, Judit Szecsi, Catherine Dogimont, Jerome Salse, Moussa Benhamed, Mohamed Zouine, Adnane Boualem, Abdelhafid Bendahmane. Cantaloupe melon genome reveals 3D chromatin features and structural relationship with the ancestral cucurbitaceae karyotype. iScience, Volume 25, Issue 1, 21 January 2022, 103696.

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43-Rodriguez-Granados NY, Ramirez-Prado JS, Brik-Chaouche R, An J, Manza-Mianza D, Sircar S, Troadec C, Hanique M, Soulard C, Costa R, Dogimont C, Latrasse D, Raynaud C, Boualem A, Benhamed M, Bendahmane A. CmLHP1 proteins play a key role in plant development and sex determination in melon (Cucumis melo). Plant J. 2021 Dec 12. doi: 10.1111/tpj.15627. Epub ahead of print. PMID: 34897855.

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42-Brisou G, Piquerez SJM, Minoia S, Marcel F, Cornille A, Carriero F, Boualem A, Bendahmane A. Induced mutations in SlE8 and SlACO1 control tomato fruit maturation and shelf-life. J Exp Bot. 2021 Oct 26;72(20):6920-6932.

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41-Clepet C, Devani RS, Boumlik R, Hao Y, Morin H, Marcel F, Verdenaud M, Mania B, Brisou G, Citerne S, Mouille G, Lepeltier JC, Koussevitzky S, Boualem A, Bendahmane A. (2021) The miR166-SlHB15A regulatory module controls ovule development and parthenocarpic fruit set under adverse temperatures in tomato. Mol Plant. 2021 Jul 5;14(7):1185-1198.

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40-Jacob P, Brisou G, Dalmais M, Thévenin J, van der Wal F, Latrasse D, Suresh Devani R, Benhamed M, Dubreucq B, Boualem A, Lepiniec L, Immink RGH, Hirt H, Bendahmane A. (2021) The Seed Development Factors TT2 and MYB5 Regulate Heat Stress Response in Arabidopsis. Genes (Basel). 2021 May 15;12(5):746.

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39-Roldan MVG, Izhaq F, Verdenaud M, Eleblu J, Haraghi A, Sommard V, Chambrier P, Latrasse D, Jégu T, Benhamed M, Szécsi J, Bendahmane M, Boualem A, Bendahmane A (2020) Integrative genome-wide analysis reveals the role of WIP proteins in inhibition of growth and development. Nature Commun Biol 15;3(1):239.

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38-Kim S, Piquerez SJM, Ramirez-Prado JS, Mastorakis E, Veluchamy A, Latrasse D, Manza-Mianza D, Brik-Chaouche R, Huang Y, Rodriguez-Granados NY, Concia L, Blein T, Citerne S, Bendahmane A, Bergounioux C, Crespi M, Mahfouz MM, Raynaud C, Hirt H, Ntoukakis V, Benhamed M. (2020) GCN5 modulates salicylic acid homeostasis by regulating H3K14ac levels at the 5' and 3' ends of its target genes. Nucleic Acids Res. 19;48:5953-5966.

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37-Concia L, Veluchamy A, Ramirez-Prado JS, Martin-Ramirez A, Huang Y, Perez M, Domenichini S, Rodriguez Granados NY, Kim S, Blein T, Duncan S, Pichot C, Manza-Mianza D, Juery C, Paux E, Moore G, Hirt H, Bergounioux C, Crespi M, Mahfouz MM, Bendahmane A, Liu C, Hall A, Raynaud C, Latrasse D, Benhamed M. (2020) Wheat chromatin architecture is organized in genome territories and transcription factories. Genome Biol. 29;21(1):104.

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36-Gomez Roldana MC, Périlleux C, Morina H, Huerga-Fernandez S, Latrasse D, Benhamed M, Bendahmane, A. (2017). Natural and induced loss of function mutations in SlMBP21 MADS-box gene led to jointless-2 phenotype in tomato. Scientific Reports, 7. DOI : 10.1038/s41598-017-04556-1

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35-Ligerot, A. de Saint Germain, T. Waldie, C. Troadec, S. Citerne, N. Kadakia, J-P. Pillot, M.  Prigge, G. Aubert, A. Bendahmane, O. Leyser, M. Estelle, F. Debellé, C. Rameau (2017) The Pea Branching RMS2 Gene Encodes the PsAFB4/5 Auxin Receptor and is 3 Involved in an Auxin-Strigolactone Regulation Loop. Plos Genetics. Dec 8;13(12):e1007089.

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34-Kirienko AN, Porozov YB, Malkov NV, Akhtemova GA, Le Signor C, Thompson R, Saffray C, Dalmais M, Bendahmane A, Tikhonovich IA, Dolgikh EA (2018) Role of a receptor-like kinase K1 in pea Rhizobium symbiosis development Planta 248:1101–1120

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33-François L, Verdenaud M, Fu X, Ruleman D, Dubois A, Vandenbussche M, Bendahmane A, Raymond O, Just J, Bendahmane M. (2018) A miR172 target-deficient AP2-like gene correlates with the double flower phenotype in roses. Sci Rep. 27;8(1):12912.

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32-Platon L, Zehraoui F, Bendahmane A.,  Fariza Tahi (2018) IRSOM, a reliable identifier of ncRNAs based on supervised self-organizing maps with rejection. Bioinformatics, Vol: 34, Pages i620–i628

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31-Fonouni-Farde C, Miassod A, Laffont C, Morin H, Bendahmane A, Diet A, Frugier F. (2019) Gibberellins negatively regulate the development of Medicago truncatula root system. Sci Rep. Feb 20;9(1):2335.

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30-Fruchard C, Badouin H, Latrasse D, Devani RS, Muyle A, Rhoné B, Renner SS, Banerjee AK, Bendahmane A, Marais GAB. (2020) Evidence for Dosage Compensation in Coccinia grandis, a Plant with a Highly Heteromorphic XY System. Genes (Basel). 2020 Jul 13;11(7):787.

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29-Fantini E, Sulli M, Zhang L, Aprea G, Jiménez-Gómez JM, Bendahmane A, Perrotta G, Giuliano G, Facella P (2019) Pivotal Roles of Cryptochromes 1a and 2 in Tomato Development and Physiology. Plant Physiol.179(2):732-748.

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28- Girardin A, Wang T, Ding Y, Keller J, Buendia L, Gaston M, Ribeyre C, Gasciolli V, Auriac MC, Vernié T, Bendahmane A, Ried MK, Parniske M, Morel P, Vandenbussche M, Schorderet M, Reinhardt D, Delaux PM, Bono JJ, Lefebvre B. (2020) LCO Receptors Involved in Arbuscular Mycorrhiza Are Functional for Rhizobia Perception in Legumes. Curr Biol. 2019 Dec 16;29(24):4249-4259.e5.

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27- Devani RS, Chirmade T, Sinha S, Bendahmane A, Dholakia BB, Banerjee AK, Banerjee J (2019) Flower bud proteome reveals modulation of sex-biased proteins potentially associated with sex expression and modification in dioecious Coccinia grandis. BMC Plant Biol. 2019 Jul 23;19(1):330.

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26- Kreplak J, Madoui MA, Cápal P, Novák P, Labadie K, Aubert G, Bayer PE, Gali KK, Syme RA, Main D, Klein A, Bérard A, Vrbová I, Fournier C, d'Agata L, Belser C, Berrabah W, Toegelová H, Milec Z, Vrána J, Lee H, Kougbeadjo A, Térézol M, Huneau C, Turo CJ, Mohellibi N, Neumann P, Falque M, Gallardo K, McGee R, Tar'an B, Bendahmane A, Aury JM, Batley J, Le Paslier MC, Ellis N, Warkentin TD, Coyne CJ, Salse J, Edwards D, Lichtenzveig J, Macas J, Doležel J, Wincker P, Burstin J. (2019) A reference genome for pea provides insight into legume genome evolution. Nat Genet. Sep;51(9):1411-1422.

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25- Eleblu JSY, Haraghi A, Mania B, Camps C, Rashid D, Morin H, Dogimont C, Boualem A, Bendahmane A. (2019) The gynoecious CmWIP1 transcription factor interacts with CmbZIP48 to inhibit carpel development. Sci Rep. 28;9(1):15443.

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24-Roldan MVG, Izhaq F, Verdenaud M, Eleblu J, Haraghi A, Sommard V, Chambrier P, Latrasse D, Jégu T, Benhamed M, Szécsi J, Bendahmane M, Boualem A, Bendahmane A (2020) Integrative genome-wide analysis reveals the role of WIP proteins in inhibition of growth and development. Nature Commun Biol 15;3(1):239.

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23- Zhao G, Lian Q, Zhang Z, Fu Q, He Y, Ma S, Ruggieri V, Monforte AJ, Wang P, Julca I, Wang H, Liu J, Xu Y, Wang R, Ji J, Xu Z, Kong W, Zhong Y, Shang J, Pereira L, Argyris J, Zhang J, Mayobre C, Pujol M, Oren E, Ou D, Wang J, Sun D, Zhao S, Zhu Y, Li N, Katzir N, Gur A, Dogimont C, Schaefer H, Fan W, Bendahmane A, Fei Z, Pitrat M, Gabaldón T, Lin T, Garcia-Mas J, Xu Y, Huang S. (2019) A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits. Nat Genet. 2019 Nov;51(11):1607-1615.

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22- Arun A, Coelho SM, Peters AF, Bourdareau S, Pérès L, Scornet D, Strittmatter M, Lipinska AP, Yao H, Godfroy O, Montecinos GJ, Avia K, Macaisne N, Troadec C, Bendahmane A, Cock JM (2019) Convergent recruitment of TALE homeodomain life cycle regulators to direct sporophyte development in land plants and brown algae. Elife. 15;8. pii: e43101.

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21-Ruggieri V, Alexiou KG, Morata J, Argyris J, Pujol M, Yano R, Nonaka S, Ezura H, Latrasse D,  Boualem A, Benhamed M, Bendahmane A, Cigliano RA, Sanseverino W, Puigdomènech P, Casacuberta JM, Garcia-Mas J (2018) An improved assembly and annotation of the melon (Cucumis melo L.) reference genome. Scietific Reports 8 (1), 8088

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20-Giner, A., Pascual, L., Bourgeois, M., Gyetvai, G., Rios, P., Picó, B., Troadec, C., Bendahmane, A., Garcia-Mas, J., Martín-Hernández, AM (2017). A mutation in the melon Vacuolar Protein Sorting 41prevents systemic infection of Cucumber mosaic virus. Scientific reports, 7 (1), 10471. DOI : 10.1038/s41598-017-10783-3

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19-Raymond O, Gouzy J, Just, Badouin H, Verdenaud M, Lemainque A, Vergne P, Moja S, Choisne N, Pont C, Carrère S, Caissard JC, Couloux A, Cottret L, Aury JM, Szecsi J, Latrasse D, Madoui MA, François L, Fu XP, Yang SH, Dubois A, Piola A, Larrieu A, Perez M, Labadie K, Perrier L, Govetto B, Labrousse Y, Villand P, Bardoux C, Boltz V, Lopez- Roques C, Heitzler P, Vernoux T, Vandenbussche M, Quesneville H, Boualem A, Bendahmane A, Liu C, Le Bris M, Salse J, Baudino S, Benhamed M, Wincker P, Bendahmane M. (2018) The Rosa genome provides new insights into the domestication of modern roses. Nature Genetics, 50 (6), 772-777.

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18-Jacob P, Avni A, and Bendahmane A. (2018) Translational Research: Exploring and Creating Genetic Diversity Trends in Plant Sciences 23(1):42-52.

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17-Ramirez-Prado JS, Piquerez SJM, Bendahmane A, Hirt H, Raynaud C, Benhamed M. (2018) Modify the Histone to Win the Battle: Chromatin Dynamics in Plant-Pathogen Interactions. Front Plant Sci. 19;9:355.

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16-Pecrix Y, Staton SE, Sallet E, Lelandais-Brière C, Moreau S, Carrère S, Blein T, Jardinaud MF, Latrasse D, Zouine M, Zahm M, Kreplak J, Mayjonade B, Satgé C, Perez M, Cauet S, Marande W, Chantry-Darmon C, Lopez-Roques C, Bouchez O, Bérard A, Debellé F, Muños S, Bendahmane A, Bergès H, Niebel A, Buitink J, Frugier F, Benhamed M, Crespi M, Gouzy J, Gamas P. (2018) Whole-genome landscape of Medicago truncatula symbiotic genes.Nat Plants. Nov 5. doi: 10.1038/s41477-018-0286-7.

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15-Devani RS, Sinha S, Banerjee J, Sinha RK, Bendahmane A, Banerjee AK. (2017) De novo transcriptome assembly from flower buds of dioecious, gynomonoecious and chemically masculinized female Coccinia grandis reveals genes associated with sex expression and modification. BMC Plant Biol. 2017 Dec 12;17(1):241.

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14- Pozniak CJ, Stein N….Bendahmane A et al., (2018). Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science. 2018 17;361(6403).

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13-Ramírez-González RH, Borrill P, Lang D, Harrington SA, Brinton J, Venturini L, Davey M, Jacobs J, van Ex F, Pasha A, Khedikar Y, Robinson SJ, Cory AT, Florio T, Concia L, Juery C, Schoonbeek H, Steuernagel B, Xiang D, Ridout CJ, Chalhoub B, Mayer KFX, Benhamed M, Latrasse D, Bendahmane A; International Wheat Genome Sequencing Consortium, Wulff BBH, Appels R, Tiwari V, Datla R, Choulet F, Pozniak CJ, Provart NJ, Sharpe AG, Paux E, Spannagl M, Bräutigam A, Uauy C. (2018). The transcriptional landscape of polyploid wheat Science. 17;361(6403)

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12-McAdam, EL., Meitzel, T., Quittenden, LJ., Davidson, SE., Dalmais, M., Bendahmane, A, Thompson, R., Smith, JJ., Nichols, DS., Urquhart, S., Gélinas-Marion, A., Aubert, G., Ross, JJ (2017). Evidence that auxin is required for normal seed size and starch synthesis in pea. The New phytologist, 216 (1), 193-204. DOI : 10.1111/nph.14690

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11-David Latrasse; Natalia Rodriguez-Granados; Alaguraj Veluchamy; Kiruthiga Gayathri Mariappan; Claudia Bevilacqua; Nicolas Crapart; Céline Camps; Vivien Sommard; Cecile Raynaud; Catherine Dogimont; Adnane Boualem; Moussa Benhamed; Abdelhafid Bendahmane (2017). The Quest for Epigenetic regulation underlying unisexual flower development in Cucumis melo. Epigenetics and Chromatin, 10 (22), 1-17.

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10-Ríos, Argyris, Vegas, Leida, Kenigswald, Tzuri, Troadec, Bendahmane, Katzir, Picó, Monforte, Garcia-Mas (2017). ETHQV6.3 is involved in melon climacteric fruit ripening and is encoded by a NAC domain transcription factor. Plant Journal. DOI : 10.1111/tpj.13596

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9-Jacob, P., Hirt, H., Bendahmane, A (2017). The heat-shock protein/chaperone network and multiple stress resistance. Plant biotechnology journal, 15 (4), 405-414. DOI : 10.1111/pbi.12659

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8-Julia Zinsmeister, Emmanuel Terrasson, Emilie Chatelain, David Lalanne, Benoit Ly Vu, Cécile Dubois-Laurent, Emmanuel Geoffriau, Christine le Signor, Marion Dalmais, Katharina vom Dorp, Peter Dörmann, Karine Gallardo, Abdelhafid  Bendahmane, Julia Buitink, Olivier Leprince. (2016) ABI5 plays a major role in regulating seed maturation and longevity in legumes. Plant Cell 28(11):2735-2754

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7- Boualem A, Lemhemdi A, Sari MA, Pignoly S, Troadec C, Abou Choucha F, Solmaz I, Sari N, Dogimont C, Bendahmane A. (2016) The Andromonoecious Sex Determination Gene Predates the Separation of Cucumis and Citrullus Genera. PLoS One. 2016 May 12;11(5):e0155444.

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6-Boualem A, Dogimont C, Bendahmane A. (2016) The battle for survival between viruses and their host plants. Curr Opin Virol. Jan 19;17:32-38.

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5-Boualem, A; Troadec, C; Camps, C; Lemhemdi, A; Morin, H; Sari, M. A.; Fraenkel-Zagouri, R; Kovalski, I; Dogimont, C; Perl-Treves, R; Bendahmane, A. (2015) A cucurbit androecy gene reveals how unisexual flowers develop and dioecy emerges. Science, 350; 6261: 688-691  

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4-Boualem A, Fleurier S, Troadec C, Audigier P, Kumar AP, Chatterjee M, Alsadon AA, Sadder MT, Wahb-Allah MA, Al-Doss AA, Bendahmane A.(2014)  Development of a Cucumis sativus TILLinG platform for forward and reverse genetics. PLoS One. 2014 May 16;9(5):e97963.

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3-Zhanga J., Boualem, A., Bendahmane A*, Minga R.* (2014) Genomics of Sex Determination. Current Opinion in Plant Biology, 18:110-6.

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2-Vicente-Dólera N, Troadec C, Moya M, del Río-Celestino M, Pomares-Viciana T, Bendahmane A, Picó B, Román B, Gómez P.(2014) First TILLING platform in Cucurbita pepo: A new mutant resource for gene function and crop improvement. PLoS One. 2014 Nov 11;9(11):e112743

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1-Martínez C, Manzano S, Megías Z, Barrera A, Boualem A, Garrido D, Bendahmane A, Jamilena M. (2014) Molecular and functional characterization of CpACS27A gene reveals its involvement in monoecy instability and other associated traits in squash (Cucurbita pepo L.). Planta.  Jun;239(6):1201-15.

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